Ketone Bodies Clear Damaged Proteins in the Brain

Summary: Ketone bodies, known for their role in energy metabolism during fasting, have been shown to directly interact with damaged proteins in the brain, aiding their clearance through autophagy. Researchers discovered that the ketone body β-hydroxybutyrate alters the solubility of misfolded proteins, facilitating their removal and reducing pathological aggregation.

Tests in mouse models of Alzheimer’s and aging confirmed these effects, with treated animals showing improvements in protein quality control and brain health. This breakthrough provides a new metabolic link to aging and neurodegeneration, offering a potential pathway for therapeutic applications.

Key Facts

  • Ketone bodies directly bind to misfolded proteins, enhancing their clearance via autophagy.
  • Mice treated with ketone esters displayed reduced aggregation of insoluble brain proteins.
  • Similar metabolites tested showed effects equal to or better than β-hydroxybutyrate.

Source: Buck Institute

Ketone bodies, produced by the body to provide fuel during fasting, have roles in regulating cellular processes and aging mechanisms beyond energy production.

Research at the Buck Institute shows that ketone bodies can best be understood as powerful signaling metabolites affecting brain function in aging and Alzheimer’s disease.

A new study demonstrates that ketone bodies and similar metabolites have profound effects on the proteome and protein quality control in the brain.

This shows a neuron.
While acknowledging that other mechanisms like energy supply are also important to brain health, Newman calls the discovery new biology. Credit: Neuroscience News

Publishing in Cell Chemical Biology, Buck Institute scientists, working in mouse models of Alzheimer’s disease and aging, and in the nematode C. elegans, reveal the ketone body β-hydroxybutyrate interacts directly with misfolded proteins, altering their solubility and structure so they can be cleared from the brain through the process of autophagy.

Previous studies have shown that boosting ketone bodies through diet, exercise and supplementation can be good for brain health and cognition, both in rodents and humans.

Senior author John Newman, MD, PhD, an assistant professor at the Buck, says many theorized that the ketone body-based improvements were caused by increased energy to the brain or a reduction in brain inflammation, with reported improvements in amyloid plaques in mouse models being an indirect by-product. 

“Now we know that’s not the whole story,” he said.  “Ketone bodies interact with damaged and misfolded proteins directly, making them insoluble so they can be pulled from the cell and recycled.” 

While acknowledging that other mechanisms like energy supply are also important to brain health, Newman calls the discovery new biology.

“It’s a new link between metabolism in general, ketone bodies and aging,” he said.

“Directly linking changes in a cell’s metabolic state to changes in the proteome is really exciting.”

Noting that ketone bodies are easy to manipulate experimentally and therapeutically, Newman adds, “This might be a powerful avenue to assist with global clearing of damaged proteins.

“We’re just scratching the surface as to how this might be applied to brain aging and neurodegenerative disease.” 

In addition to testing the changing solubility and structure of proteins in test tubes, the project also involved feeding a ketone ester to mice to confirm that the test tube results were reproduced in the brain. In mice, the ketone ester treatment resulted in clearance rather than pathological aggregation of insoluble proteins.

The work also highlights the power of the Buck’s collaborative environment.

The Schilling lab generated detailed proteome-wide solubility maps from both the test tube and mouse experiments.

To test if the solubility changes caused by ketone bodies helped improve models of pathological aggregation, the  Lithgow lab fed ketone bodies to tiny nematode worms that were genetically modified to express the human equivalent of amyloid beta, which causes amyloid plaques.

“The amyloid beta affects muscles and paralyzes the worms,” says Sidharth Madhavan, a PhD candidate and lead author on the study.

“Once they were treated with ketone bodies the animals recovered their ability to swim. It was really exciting to see such a dramatic impact in a whole animal.”  

Madhavan is now pursuing whether ketone bodies and related metabolites have similar effects outside the brain, such as in the gut. A key next step will be to test this new protein quality control mechanism in people to help guide how best to apply it in therapies, he adds.

Newman says the study highlights a new form of metabolic regulation of protein quality control.

“This is not just about ketone bodies,” he said.

“We tested similar metabolites in test tubes and a bunch of them had similar effects. In some cases, they performed better than β-hydroxybutyrate. It’s beautiful to imagine that changing metabolism results in this symphony of molecules cooperating together to improve brain function.”

Funding: This work was supported by the National Institutes of Health (NIH R01AG067333, NIA T32AG052374, NIA T32 AG000266, NIH R01AG067333-02S1), a sponsored research agreement from BHB Therapeutics, University of Southern California Provost Fellowship Funding, the Larry L. Hillblom Foundation, and Buck Institute institutional funding.

About this neuroscience research news

Author: Kris Rebillot
Source: Buck Institute
Contact: Kris Rebillot – Buck Institute
Image: The image is credited to Neuroscience News

Original Research: Open access.
B-hydroxybutyrate is a metabolic regulator of proteostasis in the aged and Alzheimer’s disease brain” by John Newman et al. Cell Chemical Biology


Abstract

B-hydroxybutyrate is a metabolic regulator of proteostasis in the aged and Alzheimer’s disease brain

Ketone bodies, small molecules that provide lipid-derived energy to cells during fasting, have been linked to various mechanisms of brain aging and increased healthy longevity in mice, and other fasting metabolism mechanisms have been linked to proteostasis.

These data fill an important puzzle piece in the literature on pathogenic protein clearance under varying metabolic states.

Here, we provide a direct molecular mechanism for the regulation of misfolded proteins by ketone bodies and related metabolites.

While many factors can affect protein solubility in vitro, we showed that this mechanism is robust and reproducibly not dependent on covalent protein modification, pH, or solute load.

Importantly, we reproduced the ex vivo effect in vivo, using a ketone ester to indirectly deliver exogenous R-βHB to the mouse brain via hepatic metabolism to R-βHB and physiological transport of R-βHB into the brain without other exogenous biochemical alterations.

R-βHB insolubilization targets that we identified ex vivo strongly overlap with targets found in vivo, supporting the similarity of mechanism between the ex vivo and in vivo systems.

We validated the physiological relevance of the mechanism by showing rescue in cell-based and C. elegans models of amyloid-β proteotoxicity.

Given that proteostatic mechanisms like autophagy are known to be activated by nutrient deprivation, it is unsurprising that evolutionary pressures would encourage the clearance of pathogenic proteins during ketosis to promote cellular health in organisms seeking additional substrate for ATP production.

In this situation, ketone bodies are janitors of damaged proteins, chaperoning away molecular waste so organisms can operate at peak molecular fitness.

This mechanism can be leveraged for therapeutic development in aging and NDDs, including via pharmacological approaches for which we provide proof of principle with BH-BD.

Understanding the molecular mechanisms of metabolism is an essential aspect of the future of accessible therapeutic interventions in aging and NDDs.

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