This shows a child and butterflies.
The team found an abnormal imbalance of excitatory neurons in the forebrain of people with the disorder, depending on their head size. Credit: Neuroscience News

Mini-Brains’ Reveal Autism’s Neuronal Imbalance Origins

Summary:Scientists utilized organoids, or “mini-brains,” to explore the roots of autism spectrum disorder (ASD). Their study highlighted an imbalance of excitatory cortical neurons in the forebrains of ASD patients.

This advanced technology mimics brain development alterations that occur in utero, potentially pinpointing when ASD begins. The findings build on years of research, shedding light on the genetic origins of autism.

Key Facts:

  1. The research used organoids to simulate the brain development processes of those with ASD, revealing an imbalance of excitatory cortical neurons.
  2. These “mini-brains” were derived from the skin cells of ASD patients, reprogrammed into pluripotent stem cells, then coaxed into brain cells.
  3. The study identified a connection between the neuronal imbalance and the activity of specific genes, or “transcription factors,” essential for early brain development.

Source: Mayo Clinic

Using human “mini-brain” models known as organoids, Mayo Clinic and Yale University scientists have discovered that the roots of autism spectrum disorder may be associated with an imbalance of specific neurons that play a critical role in how the brain communicates and functions. The specific cells are known as excitatory cortical neurons.

The new study is published in Nature Neuroscience.


The team found an abnormal imbalance of excitatory neurons in the forebrain of people with the disorder, depending on their head size.

“This organoid technology allowed us to recreate the brain development alteration that happened in the patients when they were in the uterus, which is believed to be the time when autism spectrum disorder originates,” says Alexej Abyzov, Ph.D., a genomic researcher in the Department of Quantitative Health Sciences at the Mayo Clinic Center for Individualized Medicine. Dr. Abyzov is a senior author of the study.

What is autism spectrum disorder

Autism spectrum disorder is a neurological condition that affects the way people perceive and interact with others, leading to challenges in social communication and behavior.

The term “spectrum” emphasizes the broad range of symptoms and severity, and includes autism, Asperger’s syndrome, childhood disintegrative disorder and an unspecified form of pervasive developmental disorder. 

Nearly 1 in 36 children in the U.S. has been identified with autism spectrum disorder, according to estimates from the Centers for Disease Control’s Autism and Developmental Disabilities Monitoring Network.

More about “mini-brains”

For the study, the scientists first created miniature 3D brain-like models, called organoids. The pea-sized clusters of cells began as skin cells from people with autism spectrum disorder.

The skin cells were placed in a culture dish and “reprogrammed” back into a stem-cell-like state, called induced pluripotent stem cells. These so-called master cells can be coaxed to develop into any cell in the body, including brain cells.  

Next, the scientists used a special technology called single-cell RNA sequencing to study the gene expression patterns of individual brain cells. In all, they examined 664,272 brain cells at three different stages of brain development.

The scientists also discovered that the neuron imbalance stemmed from changes in the activity of certain genes known as “transcription factors,” which play a crucial role in directing the development of cells during the initial stages of brain formation.

Building evidence

This study builds on 13 years of published studies on autism spectrum disorder by Dr. Abyzov and his collaborators, including Flora Vaccarino, M.D., a neuroscientist at Yale University.

In one pioneering study, they showed molecular differences in organoids between people with autism and those without and implicated the deregulation of a specific transcription factor called FOXG1 as an underlying cause of the disorder.

“Autism is mostly a genetic disease. Our goal is to be able to determine the risk of autism spectrum disorder and possibly prevent it in an unborn child using prenatal genetic testing. However, this would require detailed knowledge of how brain regulation gets derailed during development. There are many aspects in which organoids could help in this direction,” says Dr. Abyzov.

Review the study for a complete list of authors, disclosures, and funding.

About this autism research news

Author: Emily DeBoom
Source: Mayo Clinic
Contact: Emily DeBoom – Mayo Clinic
Image: The image is credited to Neuroscience News

Original Research: Open access.
Modeling idiopathic autism in forebrain organoids reveals an imbalance of excitatory cortical neuron subtypes during early neurogenesis” by Alexandre Jourdon et al. Nature Neuroscience


Modeling idiopathic autism in forebrain organoids reveals an imbalance of excitatory cortical neuron subtypes during early neurogenesis

Idiopathic autism spectrum disorder (ASD) is highly heterogeneous, and it remains unclear how convergent biological processes in affected individuals may give rise to symptoms.

Here, using cortical organoids and single-cell transcriptomics, we modeled alterations in the forebrain development between boys with idiopathic ASD and their unaffected fathers in 13 families.

Transcriptomic changes suggest that ASD pathogenesis in macrocephalic and normocephalic probands involves an opposite disruption of the balance between excitatory neurons of the dorsal cortical plate and other lineages such as early-generated neurons from the putative preplate.

The imbalance stemmed from divergent expression of transcription factors driving cell fate during early cortical development.

While we did not find genomic variants in probands that explained the observed transcriptomic alterations, a significant overlap between altered transcripts and reported ASD risk genes affected by rare variants suggests a degree of gene convergence between rare forms of ASD and the developmental transcriptome in idiopathic ASD.

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